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Stochastic modelling of the T cell repertoire with epitope affinity

Published in Immunology 2020, AAI annual meeting, 2020

Recommended citation: Daniel F Luque Duque, Carmen Molina-Paris, Grant Lythe, Martin Lopez Garcia, Paul Glyndwr Thomas, and Jessica Gaevert. Stochastic modelling of the T cell repertoire with epitope affinity. The Journal of Immunology, volume 204, Supplement, pages 94.18–94.18, 05 2020.
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Quantifying T Cell Cross-Reactivity: Influenza and Coronaviruses

Published in Viruses, 2021

Recommended citation: Jessica Ann Gaevert, Daniel Luque Duque, Grant Lythe, Carmen Molina-París, and Paul Glyndwr Thomas. Quantifying T Cell Cross-Reactivity: Influenza and Coronaviruses. Viruses, volume 13, page 1786. Multidisciplinary Digital Publishing Institute, 2021.
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Pre-existing humoral immunity to human common cold coronaviruses negatively impacts the protective SARS-CoV-2 antibody response

Published in Cell Host & Microbe, 2022

Recommended citation: Chun-Yang Lin, Joshua Wolf, David C Brice, Yilun Sun, Macauley Locke, Sean Cherry, Ashley H Castellaw, Marie Wehenkel, Jeremy Chase Crawford, Veronika I Zarnitsyna, Daniel Duque, Kim J. Allison, et al. Pre-existing humoral immunity to human common cold coronaviruses negatively impacts the protective SARS-CoV-2 antibody response. Cell Host & Microbe, volume 30, pages 83–96.e4. Elsevier, 2022.
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Multi-variate model of T cell clonotype competition and homeostasis

Published in Scientific Reports, 2023

Recommended citation: Daniel Luque Duque, Jessica A Gaevert, Paul G Thomas, Martín López-García, Grant Lythe, and Carmen Molina-París. Multi-variate model of T cell clonotype competition and homeostasis. Scientific Reports, volume 13, page 21995. Nature Publishing Group UK London, 2023.
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Stochastic modelling of T cell populations

Published: April 16, 2021

Stochastic modelling of TCR-epitope recognition in the context of cross-reactivity

Published: June 04, 2021

Multi-variate competition for survival stimulus of T cell clonotypes in homeostasis

Published: June 17, 2021

Multivariate competition for survival stimulus of T cell clonotypes in homeostasis

Published: November 28, 2021

Stochastic modelling of TCR-epitope recognition in the context of cross-reactivity

Published: February 08, 2022

Stochastic modelling of TCR-epitope recognition in the context of cross-reactivity

Published: June 29, 2022

Stochastic modelling of TCR-epitope recognition in the context of cross-reactivity

Published: September 20, 2022

Quantifying thymic output using TCR sequencing data

Published: May 27, 2025

Quantifying thymic output using TCR sequencing data

Published: September 04, 2025

Estimating T cell proliferation: Using maths to answer biological questions

Published: March 17, 2026

MATH2920 Computational Mathematics

Tutorials and marking, University of Leeds, School of Maths, 2021

• Led tutorials for the MATH2920 Computational Mathematics undergraduate module
• Marked weekly assignments and final projects.

Introduction to Mathematical modelling in Immunology

MSc lecture, Imperial College London, Faculty of Medicine, 2024

• Delivered the introductory lecture on Mathematical modelling in Immunology for the Immunology MSc programme at Imperial College London from 2023 to 2026.